STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481013Hemoglobin, alpha embryonic 5; Belongs to the globin family. (145 aa)    
Predicted Functional Partners:
LOC103468710
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
0.905
LOC103481014
Hemoglobin beta embryonic-2; Belongs to the globin family.
  
0.823
HBE1
Hemoglobin subunit epsilon 1; Belongs to the globin family.
  
0.782
LOC103468709
GLOBIN domain-containing protein; Belongs to the globin family.
  
0.780
ENSPREP00000033412
Peptidase S1 domain-containing protein.
   
 0.750
LOC103478806
Cytochrome b5 reductase 4.
   
 0.666
LOC103468714
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
0.622
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
      
 0.560
LOC103475578
Beta 3-glucosyltransferase b.
      
 0.549
LOC103474964
Beta 3-glucosyltransferase a.
      
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.