STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474387Down syndrome cell adhesion molecule b. (2070 aa)    
Predicted Functional Partners:
ptprg
Carbonic anhydrase XVI b.
    
 0.556
LOC103469050
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
   
 
 0.537
LOC103470979
Teneurin transmembrane protein 1.
   
 
 0.533
ENSPREP00000017519
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
   
 
 0.531
LOC103480490
Netrin 5.
   
 0.524
LOC103468394
Netrin 1b.
   
 0.524
NTN1
Netrin 1.
   
 0.524
LOC103481112
Netrin 2.
   
 0.524
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.490
gabrg2
Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.486
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.