STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476358Vasodilator stimulated phosphoprotein a. (381 aa)    
Predicted Functional Partners:
nek2
NIMA-related kinase 2.
    
 0.605
nf1
Neurofibromin 1b.
    
 0.605
ENSPREP00000007769
Filamin binding LIM protein 1.
    
 0.600
tes
Testis derived transcript (3 LIM domains).
   
 0.578
ENSPREP00000004733
Uncharacterized protein.
   
 0.542
zyx
Zyxin.
   
 0.542
trip6
Uncharacterized protein.
    
 0.541
LOC103463937
LIM domain containing preferred translocation partner in lipoma.
    
 0.541
LOC103479056
Profilin; Belongs to the profilin family.
   
 0.493
LOC103463469
Profilin; Belongs to the profilin family.
   
 0.493
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.