STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481016Forkhead box J1b. (462 aa)    
Predicted Functional Partners:
rfx2
Regulatory factor X, 2 (influences HLA class II expression).
    
 
 0.647
gmnc
Uncharacterized protein.
      
 0.560
LOC103466129
Uncharacterized protein.
      
 0.529
clg15h6orf118
TSNAXIP1_N domain-containing protein.
   
    0.520
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
   
  
 0.474
rfx3
Regulatory factor X, 3 (influences HLA class II expression).
    
 
 0.474
rfx1
Regulatory factor X, 1b (influences HLA class II expression).
    
 
 0.403
LOC103469298
Regulatory factor X, 1a (influences HLA class II expression).
    
 
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.