STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464115Fibrillin 2b. (2647 aa)    
Predicted Functional Partners:
lum
Lumican.
   
 0.622
postn
Periostin, osteoblast specific factor a.
   
  
 0.558
LOC103474978
Periostin, osteoblast specific factor b.
   
  
 0.558
ENSPREP00000013251
Microfibril associated protein 5.
   
 0.477
Mfap2
Microfibril associated protein 2.
   
 0.471
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.450
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.444
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.444
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.437
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
   
 
 0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.