STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbxBBX high mobility group box domain containing. (826 aa)    
Predicted Functional Partners:
bbox1
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.549
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
   
 0.520
lap3
Leucine aminopeptidase 3.
      
 0.477
got2
Aspartate aminotransferase.
      
 0.470
edaradd
EDAR-associated death domain.
  
     0.452
vcam1
Vascular cell adhesion molecule 1b.
  
     0.440
ENSPREP00000034063
General transcription factor IIA, 1-like.
   
  
 0.434
LOC103462700
SIN3 transcription regulator family member Ab.
   
 
 0.426
sin3a
SIN3 transcription regulator family member Aa.
   
 
 0.426
sin3b
SIN3 transcription regulator family member B.
   
 
 0.426
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.