STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrtfbMyocardin related transcription factor Ba. (897 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.799
srf
Serum response factor b.
    
 0.799
scai
Suppressor of cancer cell invasion.
   
 
  0.594
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.566
LOC103468402
Envoplakin b.
   
  
 0.565
ENSPREP00000019402
Protein kinase domain-containing protein.
   
 0.558
map2k4
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
   
 0.558
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
   
 0.552
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
   
 0.552
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
   
 0.552
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.