STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000024506PDZ domain-containing protein. (136 aa)    
Predicted Functional Partners:
LOC103472693
Protein S100; Belongs to the S-100 family.
   
 0.973
LOC103466590
Annexin.
   
 0.939
LOC103460119
Annexin.
   
 0.939
LOC103473103
Zgc:101785.
   
 0.917
LOC103478173
Protein S100; Belongs to the S-100 family.
   
 0.911
ENSPREP00000024491
Uncharacterized protein.
 
      0.893
MSL3
MSL complex subunit 3.
    
 0.670
msl2
MSL complex subunit 2.
    
 0.495
MSL2
MSL complex subunit 2.
    
 0.495
egr2
Early growth response protein 2; Sequence-specific DNA-binding transcription factor. Binds to two specific DNA sites located in the promoter region of HOXA4; Belongs to the EGR C2H2-type zinc-finger protein family.
    
 0.454
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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