STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467236Si:dkey-178k16.1. (1227 aa)    
Predicted Functional Partners:
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.694
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.694
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
   
 0.485
LOC103477420
GST N-terminal domain-containing protein.
  
  
  0.412
LOC103474260
Cell adhesion molecule 1b.
    
 
 0.410
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
     
0.407
epb41l4b
Erythrocyte membrane protein band 4.1 like 4B.
     
0.407
LOC103457670
Uncharacterized protein.
  
  
  0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.