STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000024561Unc-80 homolog (C. elegans). (1178 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.967
LOC103479055
Sodium leak channel, non-selective.
   
 0.924
ENSPREP00000008631
Sodium leak channel, non-selective.
   
 0.924
Unc80
UNC80 domain-containing protein.
 
      0.900
LOC103476498
Family with sequence similarity 155 member A.
    
 
 0.655
FAM155A
Family with sequence similarity 155 member A.
    
 
 0.655
LOC103461037
RAN binding protein 2.
   
 0.539
rbbp5
Retinoblastoma binding protein 5.
    
 0.465
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.461
tep1
Uncharacterized protein.
   
 0.450
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.