STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itpkaKinase; Belongs to the inositol phosphokinase (IPK) family. (444 aa)    
Predicted Functional Partners:
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
      
 0.681
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
      
 0.645
nkap
NFKB activating protein.
      
 0.645
PMVK
Phosphomevalonate kinase.
      
 0.645
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.560
calm1
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.560
calm3
Calmodulin 3.
    
 0.560
sar1b
Secretion associated, Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family.
      
 0.495
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.495
G0S2
G0/G1 switch 2.
      
 0.475
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.