STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466071SIN3-HDAC complex associated factor. (276 aa)    
Predicted Functional Partners:
sap30l
Sap30-like.
    
 
 0.776
sap130
Sin3A-associated protein a.
    
 
 0.772
brms1
BRMS1 transcriptional repressor and anoikis regulator.
    
 
 0.746
ing1
Inhibitor of growth protein.
    
 
 0.706
arid4b
Translocase of outer mitochondrial membrane 20.
   
 
 0.658
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 
 0.615
LOC103457806
BRMS1 like transcriptional repressor b.
    
 
 0.606
Arid4a
Tudor domain-containing protein.
   
 
 0.603
LOC103482106
BAH domain and coiled-coil containing 1b.
    
   0.553
ing2
Inhibitor of growth protein.
    
 
 0.539
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.