STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mei1Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
rec8
REC8 meiotic recombination protein b.
  
   
 0.615
rec114
REC114 meiotic recombination protein.
      
 0.550
spo11
SPO11 initiator of meiotic double stranded breaks.
      
 0.549
hormad1
HORMA domain containing 1.
      
 0.524
meioc
Uncharacterized protein.
      
 0.483
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
      
 0.477
ccdc36
Uncharacterized protein.
      
 0.473
LOC103467548
Potassium channel tetramerization domain containing 6b.
      
 0.467
haus8
Uncharacterized protein.
      
 0.440
ENSPREP00000006667
Zebrafish testis-expressed 38.
      
 0.434
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.