STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473428Myosin, light polypeptide 3, skeletal muscle. (219 aa)    
Predicted Functional Partners:
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.660
LOC103481362
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.660
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.656
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.656
MYL2
Myosin light chain 2.
   
 0.636
LOC103464948
Myosin, light chain 9a, regulatory.
   
0.636
LOC103456858
Uncharacterized protein.
   
0.636
myl7
Myosin, light chain 7, regulatory.
   
 0.636
LOC103479826
Uncharacterized protein.
   
0.636
LOC103469530
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 0.636
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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