STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tada3Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. (431 aa)    
Predicted Functional Partners:
LOC103459886
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.997
tada2a
Transcriptional adapter.
    
 0.997
sgf29
SAGA complex associated factor 29.
    
 0.996
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.995
taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.995
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.990
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.986
tada2b
Transcriptional adapter.
    
 0.982
kat2b
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.976
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.976
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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