LOC103460434 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103460434

Uncharacterized protein. (388 aa)

Predicted Functional Partners:

pdpk1

0.748

rictor

0.732

rptor

0.725

rps6

0.702

mapkap1

0.686

tsc2

0.615

prkdc

0.609

ENSPREP00000016378

0.609

smg1

0.609

Mtor

0.609

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000016378	LOC103460434	ENSPREP00000016378	ENSPREP00000025043	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.609
ENSPREP00000016378	Mtor	ENSPREP00000016378	ENSPREP00000016474	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Serine/threonine-protein kinase TOR.	0.934
ENSPREP00000016378	mapkap1	ENSPREP00000016378	ENSPREP00000017304	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	MAPK associated protein 1.	0.984
ENSPREP00000016378	pdpk1	ENSPREP00000016378	ENSPREP00000026362	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	3-phosphoinositide dependent protein kinase 1b.	0.529
ENSPREP00000016378	rictor	ENSPREP00000016378	ENSPREP00000015091	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	RPTOR independent companion of MTOR, complex 2 a.	0.971
ENSPREP00000016378	rps6	ENSPREP00000016378	ENSPREP00000006473	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.578
ENSPREP00000016378	rptor	ENSPREP00000016378	ENSPREP00000004520	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Regulatory associated protein of MTOR, complex 1.	0.987
ENSPREP00000016378	tsc2	ENSPREP00000016378	ENSPREP00000000549	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	TSC complex subunit 2.	0.880
LOC103460434	ENSPREP00000016378	ENSPREP00000025043	ENSPREP00000016378	Uncharacterized protein.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.609
LOC103460434	Mtor	ENSPREP00000025043	ENSPREP00000016474	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.609
LOC103460434	mapkap1	ENSPREP00000025043	ENSPREP00000017304	Uncharacterized protein.	MAPK associated protein 1.	0.686
LOC103460434	pdpk1	ENSPREP00000025043	ENSPREP00000026362	Uncharacterized protein.	3-phosphoinositide dependent protein kinase 1b.	0.748
LOC103460434	prkdc	ENSPREP00000025043	ENSPREP00000013864	Uncharacterized protein.	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.	0.609
LOC103460434	rictor	ENSPREP00000025043	ENSPREP00000015091	Uncharacterized protein.	RPTOR independent companion of MTOR, complex 2 a.	0.732
LOC103460434	rps6	ENSPREP00000025043	ENSPREP00000006473	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.702
LOC103460434	rptor	ENSPREP00000025043	ENSPREP00000004520	Uncharacterized protein.	Regulatory associated protein of MTOR, complex 1.	0.725
LOC103460434	smg1	ENSPREP00000025043	ENSPREP00000016434	Uncharacterized protein.	SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.	0.609
LOC103460434	tsc2	ENSPREP00000025043	ENSPREP00000000549	Uncharacterized protein.	TSC complex subunit 2.	0.615
Mtor	ENSPREP00000016378	ENSPREP00000016474	ENSPREP00000016378	Serine/threonine-protein kinase TOR.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.934
Mtor	LOC103460434	ENSPREP00000016474	ENSPREP00000025043	Serine/threonine-protein kinase TOR.	Uncharacterized protein.	0.609