STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apofApolipoprotein F. (426 aa)    
Predicted Functional Partners:
cetp
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
     
 0.834
apob
Apolipoprotein Ba.
   
 
 0.653
LOC103457447
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.653
ENSPREP00000010257
Uncharacterized protein.
   
 
 0.653
ENSPREP00000010344
Vitellogenin domain-containing protein.
   
 
 0.648
c1galt1
Si:dkey-202e17.1.
 
    
 0.637
pltp
Phospholipid transfer protein.
     
 0.618
LOC103467342
Zinc finger protein 385A.
      
 0.532
LOC103464167
Vitellogenin 3, phosvitinless.
   
 
 0.527
LOC103464149
Uncharacterized protein.
   
 
 0.527
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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