STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d15TBC1 domain family, member 15. (612 aa)    
Predicted Functional Partners:
LOC103465759
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
      
 0.633
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.633
RAB7A
RAB7A, member RAS oncogene family.
    
 0.579
LOC103465062
RAB7a, member RAS oncogene family.
    
 0.579
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 
 0.572
LOC103462261
Plakophilin 3b.
      
 0.560
cd81
Tetraspanin.
      
 0.560
ENSPREP00000021150
Fin bud initiation factor a.
      
 0.560
sergef
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.559
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.558
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.