RBPMS protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (267 aa)

Predicted Functional Partners:

QKI

0.721

LOC103458862

0.721

LOC103468719

0.540

ENSPREP00000023878

0.540

esrp2

0.533

esrp1

0.533

LOC103478079

0.518

ik

0.475

plch1

0.468

wdr44

0.440

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000023878	LOC103458862	ENSPREP00000023878	ENSPREP00000028599	RRM domain-containing protein.	QKI, KH domain containing, RNA binding a.	0.490
ENSPREP00000023878	QKI	ENSPREP00000023878	ENSPREP00000013455	RRM domain-containing protein.	QKI, KH domain containing, RNA binding 2.	0.490
ENSPREP00000023878	RBPMS	ENSPREP00000023878	ENSPREP00000025128	RRM domain-containing protein.	RNA binding protein, mRNA processing factor.	0.540
LOC103458862	ENSPREP00000023878	ENSPREP00000028599	ENSPREP00000023878	QKI, KH domain containing, RNA binding a.	RRM domain-containing protein.	0.490
LOC103458862	LOC103468719	ENSPREP00000028599	ENSPREP00000019163	QKI, KH domain containing, RNA binding a.	RNA binding fox-1 homolog 2.	0.490
LOC103458862	LOC103478079	ENSPREP00000028599	ENSPREP00000011711	QKI, KH domain containing, RNA binding a.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.490
LOC103458862	RBPMS	ENSPREP00000028599	ENSPREP00000025128	QKI, KH domain containing, RNA binding a.	RNA binding protein, mRNA processing factor.	0.721
LOC103468719	LOC103458862	ENSPREP00000019163	ENSPREP00000028599	RNA binding fox-1 homolog 2.	QKI, KH domain containing, RNA binding a.	0.490
LOC103468719	QKI	ENSPREP00000019163	ENSPREP00000013455	RNA binding fox-1 homolog 2.	QKI, KH domain containing, RNA binding 2.	0.490
LOC103468719	RBPMS	ENSPREP00000019163	ENSPREP00000025128	RNA binding fox-1 homolog 2.	RNA binding protein, mRNA processing factor.	0.540
LOC103478079	LOC103458862	ENSPREP00000011711	ENSPREP00000028599	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding a.	0.490
LOC103478079	QKI	ENSPREP00000011711	ENSPREP00000013455	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding 2.	0.490
LOC103478079	RBPMS	ENSPREP00000011711	ENSPREP00000025128	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.518
QKI	ENSPREP00000023878	ENSPREP00000013455	ENSPREP00000023878	QKI, KH domain containing, RNA binding 2.	RRM domain-containing protein.	0.490
QKI	LOC103468719	ENSPREP00000013455	ENSPREP00000019163	QKI, KH domain containing, RNA binding 2.	RNA binding fox-1 homolog 2.	0.490
QKI	LOC103478079	ENSPREP00000013455	ENSPREP00000011711	QKI, KH domain containing, RNA binding 2.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.490
QKI	RBPMS	ENSPREP00000013455	ENSPREP00000025128	QKI, KH domain containing, RNA binding 2.	RNA binding protein, mRNA processing factor.	0.721
RBPMS	ENSPREP00000023878	ENSPREP00000025128	ENSPREP00000023878	RNA binding protein, mRNA processing factor.	RRM domain-containing protein.	0.540
RBPMS	LOC103458862	ENSPREP00000025128	ENSPREP00000028599	RNA binding protein, mRNA processing factor.	QKI, KH domain containing, RNA binding a.	0.721
RBPMS	LOC103468719	ENSPREP00000025128	ENSPREP00000019163	RNA binding protein, mRNA processing factor.	RNA binding fox-1 homolog 2.	0.540