STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN2Matrilin 2. (498 aa)    
Predicted Functional Partners:
fgl2
Fibrinogen-like 2a.
   
 0.719
NIPAL2
NIPA like domain containing 2.
      
 0.681
lum
Lumican.
   
 0.622
ENSPREP00000013251
Microfibril associated protein 5.
   
 0.477
Mfap2
Microfibril associated protein 2.
   
 0.447
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.444
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.444
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
   
 
 0.424
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
   
 
 0.424
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.413
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.