STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga3Cyclic nucleotide gated channel subunit alpha 3a. (668 aa)    
Predicted Functional Partners:
ENSPREP00000001490
Si:dkey-44k1.5.
  
0.734
cngb1
Cyclic nucleotide gated channel beta 1a.
  
0.732
LOC103482329
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.710
LOC103482304
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.709
guca1a
Guanylate cyclase activator 1A.
   
 
 0.587
guca1b
Guanylate cyclase activator 1B.
   
 
 0.571
LOC103472858
Recoverin 3.
   
 
 0.553
LOC103467179
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.534
LOC103478050
Recoverin 2.
   
 
 0.486
LOC103475792
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
  
 0.480
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.