STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc7a5Solute carrier family 7 member 5. (516 aa)    
Predicted Functional Partners:
slc3a2
Aamy domain-containing protein.
   
 0.979
LOC103458108
Solute carrier family 3 member 2b.
   
 0.973
LOC103474630
Si:dkey-202g17.3.
   
 0.973
LOC103481163
Uncharacterized protein.
  
  
 
0.901
slc3a1
Solute carrier family 3 member 1.
   
 0.598
slc38a9
Solute carrier family 38 member 9.
   
  
 0.556
slc1a5
Amino acid transporter.
   
  
 0.534
alkbh3
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
   
 0.514
kiaa0513
Zgc:91860.
   
 0.514
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.514
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.