ybx1 protein (Poecilia reticulata) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

ybx1

Y box binding protein 1. (299 aa)

Predicted Functional Partners:

snrpd3

0.724

polr2f

0.704

snrnp70

0.703

ENSPREP00000013186

0.682

ddx6

0.682

snrpe

0.681

ncbp2

0.673

polr2b

0.671

snrnp48

0.670

snrpg

0.665

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000013186	ddx6	ENSPREP00000013186	ENSPREP00000023831	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.902
ENSPREP00000013186	ncbp2	ENSPREP00000013186	ENSPREP00000031952	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.555
ENSPREP00000013186	polr2b	ENSPREP00000013186	ENSPREP00000016486	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.476
ENSPREP00000013186	polr2f	ENSPREP00000013186	ENSPREP00000024818	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.400
ENSPREP00000013186	snrpd3	ENSPREP00000013186	ENSPREP00000011038	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.557
ENSPREP00000013186	snrpe	ENSPREP00000013186	ENSPREP00000026678	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.533
ENSPREP00000013186	snrpg	ENSPREP00000013186	ENSPREP00000007882	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.520
ENSPREP00000013186	ybx1	ENSPREP00000013186	ENSPREP00000025294	Uncharacterized protein.	Y box binding protein 1.	0.682
ddx6	ENSPREP00000013186	ENSPREP00000023831	ENSPREP00000013186	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.902
ddx6	ncbp2	ENSPREP00000023831	ENSPREP00000031952	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.555
ddx6	polr2b	ENSPREP00000023831	ENSPREP00000016486	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.476
ddx6	polr2f	ENSPREP00000023831	ENSPREP00000024818	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.400
ddx6	snrpd3	ENSPREP00000023831	ENSPREP00000011038	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D3.	0.557
ddx6	snrpe	ENSPREP00000023831	ENSPREP00000026678	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.533
ddx6	snrpg	ENSPREP00000023831	ENSPREP00000007882	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein G.	0.520
ddx6	ybx1	ENSPREP00000023831	ENSPREP00000025294	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	Y box binding protein 1.	0.682
ncbp2	ENSPREP00000013186	ENSPREP00000031952	ENSPREP00000013186	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Uncharacterized protein.	0.555
ncbp2	ddx6	ENSPREP00000031952	ENSPREP00000023831	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.555
ncbp2	polr2b	ENSPREP00000031952	ENSPREP00000016486	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.738
ncbp2	snrnp70	ENSPREP00000031952	ENSPREP00000008024	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Small nuclear ribonucleoprotein 70 (U1).	0.995