STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458336Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
Slc30a1
Uncharacterized protein.
  
     0.531
SLC39A11
Solute carrier family 39 member 11.
   
 0.479
atp7a
ATPase copper transporting alpha.
  
  
 0.460
atp7b
ATPase copper transporting beta.
  
  
 0.460
slc30a6
Solute carrier family 30 member 6.
  
 
 
 0.454
ENSPREP00000009332
Solute carrier family 30 member 5.
  
 
 
0.443
slc39a13
Solute carrier family 39 member 13.
   
 0.426
slc30a9
Solute carrier family 30 member 9.
  
 
 0.417
ENSPREP00000001384
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
      
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.