STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp10aPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1467 aa)    
Predicted Functional Partners:
slco2a1
Solute carrier organic anion transporter family member.
      
 0.676
scly
Selenocysteine lyase.
   
  
 0.648
cog4
Component of oligomeric golgi complex 4.
    
 
 0.647
LOC103463937
LIM domain containing preferred translocation partner in lipoma.
   
  
 0.643
Gpr17
G protein-coupled receptor 17.
      
 0.560
Pln
Uncharacterized protein.
    
 0.508
LOC103459948
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
LOC103479551
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
LOC103458601
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.486
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.