STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475074Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family. (436 aa)    
Predicted Functional Partners:
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
  
  
 
0.902
p2rx7
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.
     
 0.752
panx2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.690
calhm3
Calcium homeostasis modulator 3.
      
 0.681
LOC103469516
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.670
LOC103459415
Anoctamin.
      
 0.651
calhm1
Calcium homeostasis modulator 1.
      
 0.647
p2rx1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.589
slc7a10
Solute carrier family 7 member 10a.
      
 0.476
LOC103460632
Uncharacterized protein.
      
 0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.