STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000025426NACHT domain-containing protein. (810 aa)    
Predicted Functional Partners:
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.784
LOC103476976
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.784
ifih1
Interferon induced with helicase C domain 1.
   
 0.734
usp14
Ubiquitin carboxyl-terminal hydrolase.
    
 0.664
rps27a
Ribosomal protein S27a.
    
  0.649
LOC103481747
Transporter associated with antigen processing, subunit type t, teleost specific.
   
  
 0.605
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.591
LOC103475332
Interferon regulatory factor.
   
 
 0.587
ENSPREP00000013399
Uncharacterized protein.
  
  
 0.570
mavs
CARD_2 domain-containing protein.
  
  
 0.564
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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