STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000025471Si:dkey-246i14.3; Belongs to the ephrin family. (167 aa)    
Predicted Functional Partners:
LOC103464524
Eph receptor A2 a.
   
 0.900
epha2
Eph receptor A2 b.
   
 0.894
LOC103481795
Nerve growth factor receptor b.
     
 0.731
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.728
LOC103473467
Tyrosine-protein kinase receptor.
    
 0.722
ntrk1
Tyrosine-protein kinase receptor.
    
 0.722
ntrk2
Neurotrophic tyrosine kinase, receptor, type 2a.
    
 0.722
ephb1
EPH receptor B1.
   
 0.718
LOC103463084
Uncharacterized protein.
   
 0.718
LOC103480564
Ephrin-B3a; Belongs to the ephrin family.
     
 0.715
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.