STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458329Taxilin beta b. (613 aa)    
Predicted Functional Partners:
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.549
slc22a23
Uncharacterized protein.
      
 0.525
snx9
Sorting nexin 9b.
      
 0.513
LOC103481737
Syntaxin 4; Belongs to the syntaxin family.
    
 0.502
hivep2
Human immunodeficiency virus type I enhancer binding protein 2a.
      
 0.479
stx1a
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.454
LOC103469661
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.454
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.454
stx3
Syntaxin 3A; Belongs to the syntaxin family.
    
 0.454
LOC103470421
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.454
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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