STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000025557Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
ENSPREP00000025529
Uncharacterized protein.
 
      0.900
clip2
CAP-GLY domain containing linker protein 2.
 
      0.857
nudc
NudC nuclear distribution protein.
     
 0.631
bub3
BUB3 mitotic checkpoint protein.
    
 0.612
cdc20
Cell division cycle 20 homolog.
     
 0.591
dctn1
Dynactin 1b.
    
 
 0.589
LOC103480555
Dynactin 1a.
    
 
 0.589
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.585
dctn2
Dynactin 2 (p50).
    
 
 0.539
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.539
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.