STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mib1Mindbomb E3 ubiquitin protein ligase 1. (994 aa)    
Predicted Functional Partners:
cables1
Cdk5 and Abl enzyme substrate 1.
    
 
 0.699
pcm1
Pericentriolar material 1.
    
 0.595
trip11
Thyroid hormone receptor interactor 11.
    
 0.560
LOC103458715
Uncharacterized protein.
   
  0.502
ENSPREP00000011750
Uncharacterized protein.
   
  0.502
LOC103472986
Uncharacterized protein.
   
  0.502
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
    
 
 0.501
nhs
Nance-Horan syndrome a (congenital cataracts and dental anomalies).
   
 0.501
LOC103462029
Nance-Horan syndrome b (congenital cataracts and dental anomalies).
   
 0.501
ift81
Intraflagellar transport 81 homolog.
    
 0.493
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.