STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467265Zgc:154075. (426 aa)    
Predicted Functional Partners:
rgn
Regucalcin.
  
 
 0.711
galk1
Galactokinase 1.
  
 
 0.690
galk2
Galactokinase 2.
  
 
 0.690
ENSPREP00000018226
NAD(P)-bd_dom domain-containing protein.
  
 
 0.682
kars1
Lysine--tRNA ligase.
  
    0.594
sord
Sorbitol dehydrogenase.
  
 
 0.574
galt
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
 0.510
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.502
htatip2
HIV-1 Tat interactive protein 2.
   
 
 0.450
tmem254
Transmembrane protein 254.
   
 
 0.442
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.