STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477556RAB25, member RAS oncogene family b. (209 aa)    
Predicted Functional Partners:
ENSPREP00000015831
Uncharacterized protein.
    
 0.788
ENSPREP00000015870
Uncharacterized protein.
    
 0.788
ENSPREP00000015917
EH domain-containing protein.
    
 0.788
itsn2
Intersectin 2a.
    
 0.788
LOC103466495
RAB3A interacting protein (rabin3)-like 1.
    
 0.725
rab3ip
RAB3A interacting protein (rabin3).
    
 0.725
LOC103468194
RAB11 family interacting protein 4 (class II) a.
    
 0.699
rab11fip4
RAB11 family interacting protein 4 (class II) b.
    
 0.699
RAB11FIP3
RAB11 family interacting protein 3.
    
 0.699
LOC103477466
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.