STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000025708Si:dkey-161j23.7. (322 aa)    
Predicted Functional Partners:
Katnal2
Katanin p60 subunit A-like 2.
    
 0.620
katnb1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
 
 0.585
CEP97
Centrosomal protein 97.
      
 0.549
cep104
Centrosomal protein 104.
      
 0.549
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.539
ift172
Intraflagellar transport 172.
    
 0.532
ift81
Intraflagellar transport 81 homolog.
    
 0.513
recql5
RecQ helicase-like 5.
    
 0.498
ttc26
Tetratricopeptide repeat domain 26.
    
 0.483
armc9
Armadillo repeat containing 9.
     
 0.477
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.