STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gdpd4Glycerophosphodiester phosphodiesterase domain containing 4a. (406 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.690
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
 0.604
Katnal2
Katanin p60 subunit A-like 2.
  
 
 0.468
ISYNA1
Inositol-3-phosphate synthase 1.
     
 0.430
fggy
FGGY carbohydrate kinase domain containing.
  
 
 0.428
shpk
Sedoheptulokinase.
  
 
 0.428
LOC103479389
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
  
 
 0.428
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
  
 
 0.428
ENSPREP00000013161
FGGY_N domain-containing protein.
  
 
 0.428
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
  
 
 0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.