STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
greb1lGREB1 like retinoic acid receptor coactivator. (1944 aa)    
Predicted Functional Partners:
LOC103468460
E1A binding protein p300 b.
    
 0.596
LOC103482005
E1A binding protein p300 a.
    
 0.596
LOC103464091
CREB binding protein a.
    
  0.590
crebbp
CREB binding protein b.
    
  0.590
sh3rf3
SH3 domain containing ring finger 3.
      
 0.549
LOC103458082
Estrogen receptor 2b.
    
 0.530
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.530
LOC103457290
Estrogen receptor 2a.
    
 0.530
tulp4
TUB like protein 4a; Belongs to the TUB family.
      
 0.475
rock1
Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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