STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dnah1Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
Dnah3
AAA_6 domain-containing protein.
 
   
 0.950
ENSPREP00000025873
AAA_6 domain-containing protein.
 
     0.948
ENSPREP00000025896
AAA_6 domain-containing protein.
 
     0.945
ENSPREP00000032345
AAA_6 domain-containing protein.
 
    0.943
ENSPREP00000019791
Uncharacterized protein.
 
    0.942
ENSPREP00000019813
AAA_6 domain-containing protein.
 
    0.942
ENSPREP00000001777
Uncharacterized protein.
 
      0.869
Dnah10
DHC_N1 domain-containing protein.
 
    0.856
ENSPREP00000002923
DHC_N1 domain-containing protein.
 
     0.785
ENSPREP00000001898
Dynein_C domain-containing protein.
 
     0.772
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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