STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd4Coiled-coil-helix-coiled-coil-helix domain containing 4a. (225 aa)    
Predicted Functional Partners:
gfer
Sulfhydryl oxidase.
    
 0.963
LOC103478033
Cytochrome c oxidase copper chaperone COX17.
   
 0.953
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.847
timm9
Translocase of inner mitochondrial membrane 9 homolog.
   
 0.828
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 0.812
timm8a
Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family.
   
 0.727
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.645
timm8b
Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family.
   
 0.627
micu1
Mitochondrial calcium uptake 1.
    
 
 0.567
ENSPREP00000032664
Coiled-coil-helix-coiled-coil-helix domain containing 2.
    
 0.566
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.