ENSPREP00000025971 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000025971

Uncharacterized protein. (427 aa)

Predicted Functional Partners:

ENSPREP00000025954

0.925

ENSPREP00000027250

0.899

ENSPREP00000027384

0.899

ENSPREP00000027407

0.899

ENSPREP00000027424

0.899

ENSPREP00000026441

0.898

ENSPREP00000027269

0.896

ENSPREP00000027690

0.871

LOC103471921

0.864

dapk2

0.843

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000025954	ENSPREP00000025971	ENSPREP00000025954	ENSPREP00000025971	Uncharacterized protein.	Uncharacterized protein.	0.925
ENSPREP00000025954	ENSPREP00000027250	ENSPREP00000025954	ENSPREP00000027250	Uncharacterized protein.	Ig-like domain-containing protein.	0.898
ENSPREP00000025954	ENSPREP00000027269	ENSPREP00000025954	ENSPREP00000027269	Uncharacterized protein.	Uncharacterized protein.	0.851
ENSPREP00000025954	ENSPREP00000027407	ENSPREP00000025954	ENSPREP00000027407	Uncharacterized protein.	Uncharacterized protein.	0.873
ENSPREP00000025954	ENSPREP00000027424	ENSPREP00000025954	ENSPREP00000027424	Uncharacterized protein.	Uncharacterized protein.	0.879
ENSPREP00000025954	ENSPREP00000027690	ENSPREP00000025954	ENSPREP00000027690	Uncharacterized protein.	Uncharacterized protein.	0.536
ENSPREP00000025954	LOC103471921	ENSPREP00000025954	ENSPREP00000018315	Uncharacterized protein.	Si:dkey-240h12.4; Belongs to the protein kinase superfamily.	0.567
ENSPREP00000025954	dapk2	ENSPREP00000025954	ENSPREP00000013843	Uncharacterized protein.	Death-associated protein kinase 2b; Belongs to the protein kinase superfamily.	0.518
ENSPREP00000025971	ENSPREP00000025954	ENSPREP00000025971	ENSPREP00000025954	Uncharacterized protein.	Uncharacterized protein.	0.925
ENSPREP00000025971	ENSPREP00000026441	ENSPREP00000025971	ENSPREP00000026441	Uncharacterized protein.	Uncharacterized protein.	0.898
ENSPREP00000025971	ENSPREP00000027250	ENSPREP00000025971	ENSPREP00000027250	Uncharacterized protein.	Ig-like domain-containing protein.	0.899
ENSPREP00000025971	ENSPREP00000027269	ENSPREP00000025971	ENSPREP00000027269	Uncharacterized protein.	Uncharacterized protein.	0.896
ENSPREP00000025971	ENSPREP00000027384	ENSPREP00000025971	ENSPREP00000027384	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000025971	ENSPREP00000027407	ENSPREP00000025971	ENSPREP00000027407	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000025971	ENSPREP00000027424	ENSPREP00000025971	ENSPREP00000027424	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSPREP00000025971	ENSPREP00000027690	ENSPREP00000025971	ENSPREP00000027690	Uncharacterized protein.	Uncharacterized protein.	0.871
ENSPREP00000025971	LOC103471921	ENSPREP00000025971	ENSPREP00000018315	Uncharacterized protein.	Si:dkey-240h12.4; Belongs to the protein kinase superfamily.	0.864
ENSPREP00000025971	dapk2	ENSPREP00000025971	ENSPREP00000013843	Uncharacterized protein.	Death-associated protein kinase 2b; Belongs to the protein kinase superfamily.	0.843
ENSPREP00000026441	ENSPREP00000025971	ENSPREP00000026441	ENSPREP00000025971	Uncharacterized protein.	Uncharacterized protein.	0.898
ENSPREP00000027250	ENSPREP00000025954	ENSPREP00000027250	ENSPREP00000025954	Ig-like domain-containing protein.	Uncharacterized protein.	0.898