STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map1aMicrotubule-associated protein 1Aa. (2575 aa)    
Predicted Functional Partners:
LOC103468938
Proline rich 14.
  
    0.466
Nfatc4
Uncharacterized protein.
  
     0.443
KRT222
Keratin 222; Belongs to the intermediate filament family.
  
    0.442
pcm1
Pericentriolar material 1.
  
     0.435
fmr1
Fragile X mental retardation 1.
    
 
 0.425
LOC103461055
Fragile X mental retardation 1.
    
 
 0.425
LOC103480164
Fragile X mental retardation, autosomal homolog 2.
    
 
 0.403
fxr1
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.