STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476386Uncharacterized protein. (957 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
  
0.747
LOC103470494
Uncharacterized protein.
  
0.746
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.666
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.666
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
   
 0.662
cnih3
Cornichon family AMPA receptor auxiliary protein 3.
   
 0.662
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.661
pick1
Protein interacting with prkca 1.
    
 0.651
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
    
 0.651
LOC103469200
G protein-coupled receptor, class C, group 5, member Ba.
      
 0.647
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.