STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474427Dynein assembly factor 1, axonemal. (582 aa)    
Predicted Functional Partners:
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 
 
 0.660
zmynd10
Zinc finger, MYND-type containing 10.
  
 
 0.658
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.650
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.649
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.626
clg1h22orf23
Uncharacterized protein.
   
    0.588
rsph9
Radial spoke head 9 homolog.
   
 0.580
ENSPREP00000017751
Dynein_attach_N domain-containing protein.
   
  
 0.561
ENSPREP00000009737
Uncharacterized protein.
    
 
 0.560
dnaaf4
Dynein axonemal assembly factor 4.
    
 
 0.552
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.