STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btbd2BTB (POZ) domain containing 2b. (577 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome subunit 3.
    
 0.674
cops2
COP9 signalosome subunit 2.
   
  0.669
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.649
LOC103474461
Cullin 3; Belongs to the cullin family.
   
 0.649
cops5
COP9 signalosome subunit 5.
    
  0.648
COPS6
COP9 signalosome subunit 6.
    
  0.593
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.593
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.578
ENSPREP00000020872
Uncharacterized protein.
    
  0.569
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.559
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.