STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc93aUnc-93 homolog A. (383 aa)    
Predicted Functional Partners:
brca1
Uncharacterized protein.
   
 
 0.698
Cnfn
Toll-like receptor 21.
    
 0.581
svopl
SVOP-like.
      
 0.549
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.549
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.549
LOC103476992
Glutathione S-transferase.
      
 0.549
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
     
 0.534
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.528
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.511
cnpy4
Canopy FGF signaling regulator 4.
   
 
 0.478
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.