STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afdnAfadin, adherens junction formation factor a. (1576 aa)    
Predicted Functional Partners:
nectin1
Nectin cell adhesion molecule 1b.
    
 0.885
LOC103474127
Uncharacterized protein.
    
 0.832
ENSPREP00000031411
Nectin cell adhesion molecule 3b.
    
 0.832
LOC103475799
F11 receptor, tandem duplicate 1.
    
 0.760
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
   
 
 0.756
tjp3
Tight junction protein 3; Belongs to the MAGUK family.
   
 
 0.693
LOC103480489
Si:dkey-33c9.6.
    
 
 0.691
LOC103466442
Tight junction protein 1b; Belongs to the MAGUK family.
   
 
 0.684
LOC103462420
Tight junction protein 1a; Belongs to the MAGUK family.
   
 
 0.684
ephb3
Receptor protein-tyrosine kinase.
    
 
 0.653
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.