STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000026258Solute carrier family 18 member 3a. (511 aa)    
Predicted Functional Partners:
chat
Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.756
LOC103481435
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.754
LOC103472577
Uncharacterized protein.
     
 0.710
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.710
ENSPREP00000004746
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.695
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.668
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
     
 0.642
cask
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.642
LOC103470626
Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.634
LOC103467654
Synaptotagmin IIa.
     
 0.568
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.