STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465060GATA binding protein 2a. (456 aa)    
Predicted Functional Partners:
nav3
Neuron navigator 3.
    
 
 0.697
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.676
Tal1
BHLH domain-containing protein.
   
 0.662
LOC103479412
T-cell acute lymphocytic leukemia 1.
   
 0.662
egfl7
EGF-like-domain, multiple 7.
   
 
 0.661
LOC103477443
Runt-related transcription factor.
    
 0.659
zfpm1
Zinc finger protein, FOG family member 1.
    
 0.645
cbfb
Core-binding factor subunit beta.
     
 0.639
foxa2
Forkhead box A2.
   
 0.636
foxa1
Fork-head domain-containing protein.
   
 0.636
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.