STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd5Potassium channel tetramerization domain containing 5a. (218 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.734
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 
 0.734
cul1
Cullin 1b; Belongs to the cullin family.
    
 
 0.623
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.607
cacul1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 
 0.557
kcnq3
Potassium voltage-gated channel, KQT-like subfamily, member 3; Belongs to the potassium channel family.
    
 
 0.552
LOC103468656
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
      
 0.528
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
      
 0.526
slc4a11
Solute carrier family 4 member 11.
      
 0.523
SLC4A11
Solute carrier family 4 member 11.
      
 0.523
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.