STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479914Transcription factor BTF3; Belongs to the NAC-beta family. (163 aa)    
Predicted Functional Partners:
naca
Nascent polypeptide associated complex subunit alpha.
   
 
 0.922
Rpl31
Ribosomal protein L31.
   
 
 0.905
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.885
nacad
NAC alpha domain containing.
   
 
 0.875
rpl6
Ribosomal protein L6.
   
 
 0.829
rpl14
Ribosomal protein L14.
   
 
 0.822
rpl21
Ribosomal protein L21.
   
   0.811
rpl32
Ribosomal protein L32.
   
   0.805
RPL37A
Ribosomal protein L37a.
   
 
 0.798
rpl10
Ribosomal protein L10.
   
 
 0.796
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.