STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (120 aa)    
Predicted Functional Partners:
rbbp4
Retinoblastoma binding protein 4.
   
 
 0.559
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 
 0.559
sbno1
Strawberry notch homolog 1 (Drosophila).
 
    
 0.556
LOC103463654
Methyl-CpG binding domain protein 3a.
   
 
 0.544
LOC103460256
Methyl-CpG binding domain protein 2.
   
 
 0.544
LOC103479450
Uncharacterized protein.
   
 
 0.544
LOC103463694
GATA zinc finger domain containing 2Ab.
    
 
 0.483
LOC103479433
Uncharacterized protein.
    
 
 0.483
gatad2b
GATA zinc finger domain containing 2B.
    
 
 0.483
GPM6A
Glycoprotein M6Ab.
   
  
 0.479
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.